基于三维荧光光谱法和PARAFAC对多环芳烃定性定量分析

三维荧光光谱法在研究多环芳烃(PAHs)类物质的荧光信息时起到了重要作用。多环芳烃类物质具有致癌性,难降解性,多由尾气排放,垃圾焚烧产生,危害着人类健康及环境,因此人们不断探索对多环芳烃检测的方法。实验选取多环芳烃中的苊和萘作为检测物质,利用FLS920荧光光谱仪,为避免荧光光谱仪本身产生的瑞利散射影响,设置起始的发射波长滞后激发波长40 nm,设置扫描的激发波长(λex)范围为:200~370 nm,发射波长(λem)范围为:240~390 nm,对多环芳烃进行荧光扫描获取荧光数据,采用三维荧光光谱技术结合平行因子算法对混合溶液中的苊和萘进行定性定量分析。实验选用的苊和萘均购于阿拉丁试剂官网,配制浓度为10 mg·L-1的一级储备液,再将一级储备液稀释,得到苊和萘浓度为0.5,1,1.5,2,2.5,3,3.5,4和4.5 mg·L-1的二级储备液,并将苊和萘进行混合。在进行光谱分析前需要对苊和萘的光谱进行预处理,采用空白扣除法扣除拉曼散射的影响,并采用集合经验模态分解(EEMD)消除干扰噪声。实验测得苊存在两个波峰,位于λex=298 nm,λem=324/338 nm处,萘存在一个波峰,位于λex=280 nm,λem=322 nm处。选用的PARAFAC算法对组分数的的选择很敏感,因此采用核一致诊断法预估组分数,估计值2和3的核一致值都在60%以上,分别对混合样品进行了2因子和3因子的PARAFAC分解,将分解后得到的激发发射光谱数据和各组分浓度数据进行归一化处理,并绘制光谱图,与归一化处理后的真实的激发发射光谱图和各组分浓度图进行对比。同时将PARAFAC得到的混合样本的预测浓度,通过计算回收率(R)和均方根误差(RMSEP)来判定定量分析的准确度。选择2因子时,各混合样品中苊和萘拟合度为95.7%和96.7%,平均回收率分别为101.8%和98.9%,均方根误差分别为0.0187和0.0316;选择3因子时,各混合样品中苊和萘拟合度为95.3%和95.8%,平均回收率分别为97%和102.5%,均方根误差分别为0.033和0.116,由三项指标可得选用2因子进行定性定量分析的效果明显好于选用3因子。分析实验结果表明,基于三维荧光光谱法和PARAFAC算法对混合样品进行定性定量分析,能够有效的判定混合样品的类别,同时能够成功的预测出混合样品的浓度。     

Insights into the Structure and Energy of DNA Nanoassemblies

Since the pioneering work of Ned Seeman in the early 1980s, the use of the DNA molecule as a construction material experienced a rapid growth and led to the establishment of a new field of science, nowadays called structural DNA nanotechnology. Here, the self-recognition properties of DNA are employed to build micrometer-large molecular objects with nanometer-sized features, thus bridging the nano- to the microscopic world in a programmable fashion. Distinct design strategies and experimental procedures have been developed over the years, enabling the realization of extremely sophisticated structures with a level of control that approaches that of natural macromolecular assemblies. Nevertheless, our understanding of the building process, i.e., what defines the route that goes from the initial mixture of DNA strands to the final intertwined superstructure, is, in some cases, still limited. In this review, we describe the main structural and energetic features of DNA nanoconstructs, from the simple Holliday junction to more complicated DNA architectures, and present the theoretical frameworks that have been formulated until now to explain their self-assembly. Deeper insights into the underlying principles of DNA self-assembly may certainly help us to overcome current experimental challenges and foster the development of original strategies inspired to dissipative and evolutive assembly processes occurring in nature.     

Tandem Use of Optical Sensing and Machine Learning for the Determination of Absolute Configuration,Enantiomeric and Diastereomeric Ratios,and Concentration of Chiral Samples

We have developed an optical method for accurate concentration, er, and dr analysis of amino alcohols based on a simple mix‐and‐measure workflow that is fully adaptable to multiwell plate technology and microscale analysis. The conversion of the four aminoindanol stereoisomers with salicylaldehyde to the corresponding Schiff base allows analysis of the dr based on a change in the UV maximum at 420 nm that is very different for the homo‐ and heterochiral diastereomers and of the concentration of the sample using a hypsochromic shift of another absorption band around 340 nm that is independent of the analyte stereochemistry. Subsequent in situ formation of Cu^II assemblies in the absence and presence of base enables quantification of the er values for each diastereomeric pair by CD analysis. Applying a linear programming method and a parameter sweep algorithm, we determined the concentration and relative amounts of each of the four stereoisomers in 20 samples of vastly different stereoisomeric compositions with an averaged absolute percent error of 1.7 %.     

A TDDFT study of some dinuclear compounds containing CpM(CO)3 or CpM(CO)2 groups

The electronic structure and spectroscopy of some representative dinuclear compounds containing CpM(CO)₃ and CpM(CO)₂ groups were studied using TDDFT (Time Dependent Density Functional Theory). These compounds contain Cp (cyclopentadienyl) as a ligand, and M can be Cr, Mo or W. Their main electronic transitions were calculated and the results are in good agreement with the experimental data. This allows the assignment of some bands whose origin was not clear. In all the cases, the carbonyls and Cp groups restrict the symmetry. The molecular orbitals that would be involved in M-M bonding interact strongly with the carbonyls and show unusual shapes and occupations. The strongest electronic bands are caused by σ→σ* transitions in most of the molecules containing CpM(CO)₃ groups, whereas in molecules such as Cp(CO)₂M≡M(CO)₂Cp the most intense bands are produced by π→π* transitions. The origin of other bands is now explained. The effect of the solvent on the electronic transitions and the use of EOM-CCSD method in some compounds were also checked.     

Gas-Sensing Activity of Amorphous Copper Oxide Porous Nanosheets

In this paper, the gas-sensing properties of copper oxide porous nanosheets in amorphous and highly crystalline states were comparatively investigated on the premise of almost the same specific surface area, morphology and size. Unexpectedly, the results show that amorphous copper oxide porous nanosheets have much better gas sensing properties than highly crystalline copper oxide to a serious of volatile organic compounds, and the lowest detection limit (LOD) of the amorphous copper oxide porous nanosheets to methanal is even up to 10 ppb. By contrast, the LOD of the highly crystalline copper oxide porous nanosheets to methanal is 95 ppb. Experiments prove that the oxygen vacancies contained in the amorphous copper oxide porous nanosheets play a key role in improving gas sensitivity, which greatly improve the chemical activity of the materials, especially for the adsorption of molecules containing oxygen-groups such as methanal and oxygen.     

Purity determination of a new antifungal drug candidate using quantitative 1H NMR spectroscopy: Method validation and comparison of calibration approaches

Quantitative nuclear magnetic resonance (qNMR) is an analytical technique that offers numerous advantages in pharmaceutical applications including minimum sample preparation and rapid data collection times with no need for response factor corrections, being a powerful tool for assaying drug content in both drug discovery and early drug development. In the present work, we have applied qNMR, using both the internal standard and the electronic reference to access in vivo concentrations 2 calibration methods, to assess the purity of RI76, a novel antifungal drug candidate. NMR acquisition and processing parameters were optimized in order to obtain spectra with intense, well-resolved signals of completely relaxed nuclei. The analytical method was validated following current guidelines, demonstrating selectivity, linearity, accuracy, precision, and robustness. The calibration approaches were statistically compared, and no significant difference was observed when comparing the obtained results and their dispersion in terms of relative standard deviation. The proposed qNMR method may, therefore, be used for both qualitative and quantitative assessments of RI76 in early drug development and for characterization of this compound.     

Everything you wanted to know about phase and reference frequency in one- and two-dimensional NMR spectroscopy

The fundamental concept of phase discussed in this tutorial aimed at providing students with an explanation of the delays and processing parameters they may find in nuclear magnetic resonance (NMR) pulse programs. We consider the phase of radio-frequency pulses, receiver, and magnetization and how all these parameters are related to phases and offsets of signals in spectra. The impact of the off-resonance effect on the phase of the magnetization is discussed before presenting an overview of how adjustment of the time reference of the free induction decay avoids first-order correction of the phase of spectra. The main objective of this tutorial is to show how the relative phase of a pulse and the receiver can be used to change the reference frequency along direct and indirect dimensions of NMR experiments. Unusual of phase incrementation with non-90° angles will be illustrated on one- and two-dimensional NMR spectra.     

13C chemical shift tensors in MOF α-Mg3(HCOO)6: Which component is more sensitive to host-guest interaction?

Metal–organic frameworks (MOFs) are a class of important porous materials with many current and potential applications. Their applications almost always involve the interaction between host framework and guest species. Therefore, understanding of host–guest interaction in MOF systems is fundamentally important. Solid-state NMR spectroscopy is an excellent technique for investigating host–guest interaction as it provides information complementary to that obtained from X-ray diffraction. In this work, using MOF α-Mg₃(HCOO)₆ as an example, we demonstrated that ¹³C chemical shift tensor of organic linker can be utilized to probe the host–guest interaction in MOFs. Obtaining ¹³C chemical shift tensor components (δ₁₁, δ₂₂, and δ₃₃, where δ₁₁ ≥ δ₂₂ ≥ δ₃₃) in this MOF is particularly challenging as there are six coordinatively equivalent but crystallographically non-equivalent carbons in the unit cell with very similar local coordination environment. Two-dimensional magic-angle-turning experiments were employed to measure the ¹³C chemical shift tensors of each individual crystallographically non-equivalent carbon in three microporous α-Mg₃(HCOO)₆ samples with different guest species. The results indicate that the δ₂₂ component (with its direction approximately being co-planar with the formate anion and perpendicular to the C−H bond) is more sensitive to the adsorbate molecules inside the MOF channel due to the weak C−H···O hydrogen bonding or the ring current effect of benzene. The ¹³C isotropic chemical shift, on the other hand, seems much less sensitive to the subtle changes in the local environment around formate linker induced by adsorption. The approach described in this study may be used in future studies on host–guest interaction within MOFs.